Prosecution Insights
Last updated: May 29, 2026
Application No. 17/628,497

PARTICLE-BASED METHOD FOR DEFINING A GUT MICROBIOTA IN HUMANS OR OTHER ANIMAL SPECIES

Non-Final OA §102§112
Filed
Jan 19, 2022
Priority
Jul 19, 2019 — provisional 62/876,379 +2 more
Examiner
JONES, DAMERON LEVEST
Art Unit
1618
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
Washington University
OA Round
2 (Non-Final)
68%
Grant Probability
Favorable
2-3
OA Rounds
0m
Est. Remaining
99%
With Interview

Examiner Intelligence

Grants 68% — above average
68%
Career Allowance Rate
726 granted / 1073 resolved
+7.7% vs TC avg
Strong +32% interview lift
Without
With
+31.5%
Interview Lift
resolved cases with interview
Typical timeline
3y 5m
Avg Prosecution
37 currently pending
Career history
1116
Total Applications
across all art units

Statute-Specific Performance

§101
0.5%
-39.5% vs TC avg
§103
42.0%
+2.0% vs TC avg
§102
8.0%
-32.0% vs TC avg
§112
37.4%
-2.6% vs TC avg
Black line = Tech Center average estimate • Based on career data from 1073 resolved cases

Office Action

§102 §112
Notice of Pre-AIA or AIA Status The present application, filed on or after March 16, 2013, is being examined under the first inventor to file provisions of the AIA . Acknowledgments and Claim Status The Examiner acknowledges receipt of the amendment filed 10/13/2025 wherein claims 2, 7-11, 17, 18, 21-23, and 31-40 were canceled and claims 1, 5, 12, and 20 were amended. Note(s): Claims 1, 3-6, 12-16, 19, 20, and 24-30 are pending. Priority This application is a 371 of PCT/US20/42678 filed 7/17/2020 and PCT/US20/42678 claims benefit to PRO of 62/876,379 filed 7/19/2019. Note(s): The earliest effective filing date is 7/19/2019 as the pending invention is fully supported by the parent applications. Claim Interpretation Independent claim 1 is directed to a composition comprising a plurality of particles of one type or a plurality of particles of more than one type, each type comprising a core comprising a tag, a unique compound of interest or a combination of compounds of interest and a unique label, wherein unique compound(s) of interest is/are stably attached to the core. Independent claim 24 is directed to a method of measuring gut microbiota functional activity as set forth in claim 24. Applicant’s Election Once again, the Examiner acknowledges Applicant’s election of Group I (pending claims 1, 3-6, 12-16, 19, and 20) in the reply filed on 4/21/2025 is acknowledged. Because applicant did not distinctly and specifically point out the supposed errors in the restriction requirement, the election was treated as an election without traverse (MPEP § 818.01(a)). Once again, in the response filed 4/21/2025, Applicant elected the species wherein (1) the particle type core comprising a tag is paramagnetic streptavidin-coated silica beads; (2) the unique label is a combination of biotinylated fluorophores PF-505, PF-510LSS, PF-633, and PF-415; (3) the unique combination of compounds of interest is glycan or a glycan derivative; (4) the fiber preparation is pea fiber preparation; and (5) the polysaccharide is a linear or branched polysaccharide. Claims 1, 3-6, 12-16, 19, and 20 read on the elected species. Initially, Applicant’s elected species was searched and no prior art was found to reject the claims. The search was expanded to the species found in the cited prior art below. The search was not further extended because prior art was found which could be used to reject one or more claims. Withdrawn Claims Claims 24-30 are withdrawn from further consideration by the examiner, 37 CFR 1.142(b), as being drawn to a non-elected invention. 112 Second Paragraph Rejections All outstanding 112 second paragraph rejections, except the following, are WITHDRAWN because Applicant amended the claims to overcome the rejections or the rejection was reconsidered. The following is a quotation of 35 U.S.C. 112(b): (b) CONCLUSION.—The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the inventor or a joint inventor regards as the invention. The following is a quotation of 35 U.S.C. 112 (pre-AIA ), second paragraph: The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the applicant regards as his invention. Claims 1, 3-6, 12-16, 19, and 20 are rejected under 35 U.S.C. 112(b) or 35 U.S.C. 112 (pre-AIA ), second paragraph, as being indefinite for failing to particularly point out and distinctly claim the subject matter which the inventor or a joint inventor (or for applications subject to pre-AIA 35 U.S.C. 112, the applicant), regards as the invention. Claims 1, 3-6, 12-16, 19, and 20: Independent claim 1 is ambiguous because it is unclear what ‘unique compound of interest’ and ‘combination of compounds of interest’ as well as ‘unique label’ Applicant is referring to that are encompassed and compatible with the pending invention. Since claims 3-6, 12-16, 19, and 20 depend upon independent claim 1 for clarity, those claims are also vague and indefinite. APPLICANT’S ASSERTIONS In summary, it is asserted that that compounds of interest are discussed in paragraphs [0074] and [0075] of the specification. It is asserted that suitable compounds include biomolecules and drugs as well as compounds in paragraph [0072]. Also, it is asserted that report labels may be that of paragraphs [0169] and [0170]. EXAMINER’S RESPONSE The arguments were considered, but deemed non-persuasive for reasons of record and those set forth below. specifically, Applicant is respectfully reminded that it is improper to import limitations from the specification into the claims. If it is not Applicant’s desire that the claims be interpreted to be any substance that is attached to a core that comprises any substance that is attached thereto (tag) and any substance that may be one of interest, then it is respectfully requested that the claims be clarified. The claims as written do not exclude any art with the appropriate compounds of which the reader may assign to be the core, a tag, or one or more unique compounds of interest. The 112 second paragraph rejections are still deemed proper as the claims are ambiguous and the metes and bounds of the claims cannot be ascertained with clarity. 102 Rejection In the event the determination of the status of the application as subject to AIA 35 U.S.C. 102 and 103 (or as subject to pre-AIA 35 U.S.C. 102 and 103) is incorrect, any correction of the statutory basis (i.e., changing from AIA to pre-AIA ) for the rejection will not be considered a new ground of rejection if the prior art relied upon, and the rationale supporting the rejection, would be the same under either status. The following is a quotation of the appropriate paragraphs of 35 U.S.C. 102 that form the basis for the rejections under this section made in this Office action: A person shall be entitled to a patent unless – (a)(1) the claimed invention was patented, described in a printed publication, or in public use, on sale, or otherwise available to the public before the effective filing date of the claimed invention. Claim 1 is rejected under 35 U.S.C. 102(a)(1) as being anticipated by Chandler et al (US Patent No. 6,268,222). Independent claim 1 is directed to a composition comprising a plurality of particles of one type or a plurality of particles of more than one type, each type comprising a core comprising a tag, a unique compound of interest or a combination of compounds of interest ("the particle-bound compound(s) of interest") and a unique label, wherein the particle-bound compound(s) of interest are stably attached to the core. Chandler et al is directed to microparticles that are attached to nanoparticles labeled with fluorescent dyes. In particular, the compositions of Chandler et al comprise a core particle having on its surface a plurality of smaller polymeric particles which are labeled with different fluorescent dyes (see entire document, especially, abstract). Thus, the limitations of independent claim 1 are met. APPLICANT’S ASSERTIONS In summary, it is asserted that Chandler does not teach or suggest particle comprising a core comprising a tag, a unique compound of interest or a combination of compounds of interest and a unique label wherein the unique compound of interest or the combination of compounds of interest are stably attached to the core. It is asserted that Chandler reports a particle surrounded by a second smaller particle. EXAMINER’S RESPONSE Applicant’s arguments were considered, but deemed non-persuasive for reasons of record. The pending claims read on any substances. Each substance present may be appropriately assigned to be the tag, label, core, and compound of interest as pending claim 1 does not limit the substances that may be selected for the various roles. In regards to the compound of interest or combination of compounds being stably attached to the core, according to MPEP 2112.01 if the composition is physically the same, then it must have the same properties. Both Applicant and the cited prior art read on components that may be appropriately assigned to be a tag, label, core, and compound(s) of interest. Thus, the properties associated with Applicant composition (being stable) would also be present in the cited prior art composition. Hence, the inventions disclose overlapping subject matter. Also, in regards to the attachment being stable, Applicant is respectfully reminded that the term “stable (or stably)” in the claim is a relative term which renders the claim is opened to interpretation by the reader (one of ordinary skill in the art). Thus, the definition of the term may vary from one reader to another. For the reasons set forth supra, the rejection is still deemed proper. Comments/Notes The full scope of the pending claims was not searched. Conclusion Claims 1, 3-6, 12-16, 19, and 20 are rejected and claims 24-30 are withdrawn. THIS ACTION IS MADE FINAL. Applicant is reminded of the extension of time policy as set forth in 37 CFR 1.136(a). A shortened statutory period for reply to this final action is set to expire THREE MONTHS from the mailing date of this action. In the event a first reply is filed within TWO MONTHS of the mailing date of this final action and the advisory action is not mailed until after the end of the THREE-MONTH shortened statutory period, then the shortened statutory period will expire on the date the advisory action is mailed, and any nonprovisional extension fee (37 CFR 1.17(a)) pursuant to 37 CFR 1.136(a) will be calculated from the mailing date of the advisory action. In no event, however, will the statutory period for reply expire later than SIX MONTHS from the mailing date of this final action. Future Correspondences Any inquiry concerning this communication or earlier communications from the examiner should be directed to D L Jones whose telephone number is (571)272-0617. The examiner can normally be reached M-F. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, Michael G. Hartley can be reached at (571)272-0616. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. /D. L. Jones/ Primary Patent Examiner Art Unit 1618 January 20, 2026
Read full office action

Prosecution Timeline

Jan 19, 2022
Application Filed
Jan 30, 2024
Response after Non-Final Action
Apr 02, 2024
Response after Non-Final Action
Jul 14, 2025
Non-Final Rejection mailed — §102, §112
Oct 13, 2025
Response Filed
Jan 22, 2026
Final Rejection mailed — §102, §112
Mar 20, 2026
Response after Non-Final Action

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Study what changed to get past this examiner. Based on 5 most recent grants.

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Prosecution Projections

2-3
Expected OA Rounds
68%
Grant Probability
99%
With Interview (+31.5%)
3y 5m (~0m remaining)
Median Time to Grant
Moderate
PTA Risk
Based on 1073 resolved cases by this examiner. Grant probability derived from career allowance rate.

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