Prosecution Insights
Last updated: April 19, 2026
Application No. 18/126,547

COMPOSITIONS FOR INHIBITING 3' REPAIR EXONUCLEASE 2 AND METHODS OF SCREENING FOR SUCH COMPOSITIONS

Non-Final OA §102§103§112
Filed
Mar 27, 2023
Examiner
WELLS, LAUREN QUINLAN
Art Unit
1622
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
The Board Of Regents Of The University Of Texas System
OA Round
1 (Non-Final)
43%
Grant Probability
Moderate
1-2
OA Rounds
2y 11m
To Grant
99%
With Interview

Examiner Intelligence

Grants 43% of resolved cases
43%
Career Allow Rate
92 granted / 213 resolved
-16.8% vs TC avg
Strong +58% interview lift
Without
With
+57.8%
Interview Lift
resolved cases with interview
Typical timeline
2y 11m
Avg Prosecution
79 currently pending
Career history
292
Total Applications
across all art units

Statute-Specific Performance

§101
1.0%
-39.0% vs TC avg
§103
34.4%
-5.6% vs TC avg
§102
14.7%
-25.3% vs TC avg
§112
27.2%
-12.8% vs TC avg
Black line = Tech Center average estimate • Based on career data from 213 resolved cases

Office Action

§102 §103 §112
Notice of Pre-AIA or AIA Status The present application, filed on or after March 16, 2013, is being examined under the first inventor to file provisions of the AIA . DETAILED ACTION The preliminary amendment filed 06/20/2023, amended claims 2, 4, 6, 8, and 10. Claims 1-10 are pending and examined on the merits herein. Priority This application claims the following priority: PNG media_image1.png 104 653 media_image1.png Greyscale Request for Information Applicant and the assignee of this application are required under 37 CFR 1.105 to provide the following information that the examiner has determined is reasonably necessary to the examination of this application. In response to this requirement, please provide a copy of each of the following items of art referred to in the specification. On pg. 20 of the specification, The Chembridge Diverset library with 30,000 small molecules is referenced. 4-benzyoyl-2-methylphenyl (2-nitropheonxy) acetate is recited in [0075] of the specification as one of these 30,000 small molecules. However, STN Registry File states that this compound entered Registry on 05/14/2019, while the effective filing date of the instant application is 10/16/2017. As such, it appears that Applicant has possession of pertinent prior art from Chembridge or another source, i.e., compound PNG media_image2.png 449 752 media_image2.png Greyscale For this reason, the request for information is being made. Claim Objections Claim 5 is objected to because of the following informalities: The term “methyl” is misspelled in claim 5; “methy” should be replaced with - -methyl- - Appropriate correction is required. Claim Rejections - 35 USC § 112(b) The following is a quotation of 35 U.S.C. 112(b): (b) CONCLUSION.—The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the inventor or a joint inventor regards as the invention. The following is a quotation of 35 U.S.C. 112 (pre-AIA ), second paragraph: The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the applicant regards as his invention. Claims 2, 4, 6, 8, and 10 are rejected under 35 U.S.C. 112(b) or 35 U.S.C. 112 (pre-AIA ), second paragraph, as being indefinite for failing to particularly point out and distinctly claim the subject matter which the inventor or a joint inventor (or for applications subject to pre-AIA 35 U.S.C. 112, the applicant), regards as the invention. The phrase “increasing effectiveness” in claims 2, 4, 6, 8 and 10, is a relative term which renders the claim indefinite. This phrase is not defined by the claim, the specification does not provide a standard for ascertaining the requisite degree, and one of ordinary skill in the art would not be reasonably apprised of the scope of the invention. It is not clear what baseline measurement or measuring tool is being relied upon to measure an “increased effectiveness.” Moreover, the metes and bounds of the term “effectiveness” is unclear. For example, it is unclear if “effectiveness” is a measure of tumor size, a measure of side effects, a measure of length of chemotherapeutic regimen, etc. As such, this phrase is indefinite. Claim Interpretation The instantly claimed compounds are interpreted as having the following structures: PNG media_image3.png 209 385 media_image3.png Greyscale 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate: N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide: PNG media_image4.png 166 436 media_image4.png Greyscale 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid: PNG media_image5.png 162 264 media_image5.png Greyscale 8-(phenylamino)naphthalene-1-sulfonic acid: PNG media_image6.png 134 177 media_image6.png Greyscale benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate: PNG media_image7.png 202 341 media_image7.png Greyscale . Claim Rejections - 35 USC § 112(a)-Scope of Enablement The following is a quotation of the first paragraph of 35 U.S.C. 112(a): (a) IN GENERAL.—The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor or joint inventor of carrying out the invention. The following is a quotation of the first paragraph of pre-AIA 35 U.S.C. 112: The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor of carrying out his invention. Claims 2, 4, 6, 8, and 10 are rejected under 35 U.S.C. 112(a) or 35 U.S.C. 112 (pre-AIA ), first paragraph, because the specification, while being enabling for a method of inhibiting TREX2 by administering a pharmaceutical composition comprising 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate, N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide, 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid, 8-(phenylamino)naphthalene-1-sulfonic acid, or benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate, does not reasonably provide enablement for a method for increasing the effectiveness of a chemotherapeutic agent in a mammalian cancer cell comprising administering to mammalian cancer cell exposed to a chemotherapeutic, a pharmaceutical composition comprising 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate or a derivative thereof, N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide or a derivative thereof, 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid or a derivative thereof, 8-(phenylamino)naphthalene-1-sulfonic acid or a derivative thereof, or benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate or a derivative thereof. The specification does not enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to use the invention commensurate in scope with these claims. The criteria for enablement set out in the In re Wands, MPEP 2164.01(a), considers the following factors: Breadth of the Claims The instant claims are directed toward a method of increasing the effectiveness of a chemotherapeutic agent in a mammalian cancer cell comprising administering to any mammalian cancer cell, in vivo or ex vivo, exposed to any chemotherapeutic agent, a pharmaceutical composition comprising 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate or a derivative thereof, N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide or a derivative thereof, 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid or a derivative thereof, 8-(phenylamino)naphthalene-1-sulfonic acid or a derivative thereof, or benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate or a derivative thereof. Thus, the claims are directed toward any type of cancer, any chemotherapeutic, and any derivative of the recited compounds. As such, the breadth of the claims is great. Level of Skill in Art The level of skill in the art is a clinician or an scientist with a PhD. State of the Prior Art STN File Registry, RN 483293-23-8 (PTO-892) teaches: PNG media_image4.png 166 436 media_image4.png Greyscale , the compound of claim 3. STN File Registry, RN 694475-06-4 (PTO-892) teaches: PNG media_image5.png 162 264 media_image5.png Greyscale , the compound of claim 5. However, neither registry file teaches these compounds in pharmaceutical compositions, let alone in methods for increasing the effectiveness of a chemotherapeutic agent. US PG-PUB 2010/022759 to Yamauchi (published 2010, PTO-892) teaches a composition comprising aninlonaphthalenesulfonic acid, PNG media_image6.png 134 177 media_image6.png Greyscale , the compound of claim 7, and water ([0071]; [0016]-[0017], [0076]-[0077]). However, Yamauchi teaches these compounds for use as dyes for the detection of lesions (pg. 9, claims 1-12), and not in methods for increasing effectiveness of a chemotherapeutic agent. WO 2012/027392 to Hansen teaches pharmaceutical compositions comprising: PNG media_image8.png 96 157 media_image8.png Greyscale (pg. 75, claim 135) and specifically teaches C-15 as a species of PNG media_image8.png 96 157 media_image8.png Greyscale : PNG media_image9.png 298 567 media_image9.png Greyscale (pg. 43), and teaches a method of preventing or treating cancer by administering the composition and a chemotherapeutic (pg. 44; pg. 78, claim 156). However, Hanson does not teach its methods for increasing effectiveness of a chemotherapeutic agent. In summary, the prior art is silent regarding the compound recited in claim 2, the prior art does not teach pharmaceutical compositions comprising the compounds of claims 4 and 6, and the prior art does not teach the instantly claimed methods of any of claims 2, 4, 6, 8, or 10. Predictability in the Art The American Cancer Society (Chemotherapy, PTO-892) teaches that there are many different types of chemo and that they do not all work exactly the same way; different types of chemo might be used for different types of cancer (pg. 1 2nd full paragraph). Cancer Research UK (How chemotherapy works, PTO-892) teaches that chemotherapy has different effects on different types of cancer (pg. 1), and that the chance of the chemotherapy curing your cancer depends on the type of cancer you have. With some cancers, chemotherapy cannot cure the cancer on its own, but can help in combination with other types of treatment (“How well chemotherapy works”). Warrick (The Conversation, “Every cancer is unique-why different cancers require different treatments, and how evolution drives drug resistance, PTO-892) teaches that cancers from different organs look distinct from one another and contain different proteins. Tumors arising in a given organ also tend to have mutations in the same set of genes, even among different patients (pg. 3). Because of differences in proteins and mutations, tumors from different organs respond differently to treatment. For example, the majority of patients with testicular cancer can be cured with traditional chemotherapy combined with surgery. However, thyroid cancer and melanoma respond minimally to chemotherapy and require different approaches (pg. 4). Thus, the effectiveness of chemotherapy depends on the type of cancer and the type of chemotherapeutic. Moreover, not all cancers respond to chemotherapy. As such, the art of treating different cancer is unpredictable as is treating cancers with chemotherapeutics. Working Examples The instant specification provides zero examples of a method of increasing the effectiveness of a chemotherapeutic agent by administering the instantly claimed compositions to a mammalian cancer cell exposed to a chemotherapeutic. It is noted that Example 16 on pg. 29 of the specification provides a prophetic example, but even this example does not mention the administration of a chemotherapeutic agent. Example 8, beginning on pg. 20 of the specification, exemplifies compounds 1 (compound of claim 1), 6 (compound of claim 7), 10 (compound of claim 3), and 11 (compound of claim 5). However example 8 is directed towards these compounds demonstrating their effectiveness as inhibitors of TREX2. Direction and Guidance In view of the broad scope of the claims, the unpredictability of the art, and the lack of working examples, the instant specification does not provide sufficient direction or guidance to use the invention as claimed in claims 2, 4, 6, 8 and 10. Quantity of Experimentation In view of the great variety of cancers, the great number of distinct chemotherapeutics, and the great number of derivatives of the instantly recited compounds, the amount of experimentation required to determine which compounds, including their derivatives, are effective to increase the effectiveness of which chemotherapeutic agents for which cancers, would be astronomical, amounting to invention and not development. The amount of experimentation is undue. Thus, while being enabling for a method of inhibiting TREX2 by administering a pharmaceutical composition comprising 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate, N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide, 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid, 8-(phenylamino)naphthalene-1-sulfonic acid, or benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate, does not reasonably provide enablement for a method for increasing the effectiveness of a chemotherapeutic agent in a mammalian cancer cell comprising administering to mammalian cancer cell exposed to a chemotherapeutic, a pharmaceutical composition comprising 4-benzoyl-2-methylphenyl (2-nitrophenoxy) acetate or a derivative thereof, N-benzyl-2-([bis(furan-2-yl)-1,2,4-triazin-3-yl] sulfanyl acetamide or a derivative thereof, 6-(benzylcarbamoyl)-1-methylcyclohex-3-ene-1-carboxylic acid or a derivative thereof, 8-(phenylamino)naphthalene-1-sulfonic acid or a derivative thereof, or benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate or a derivative thereof. Claim Rejections - 35 USC § 102 In the event the determination of the status of the application as subject to AIA 35 U.S.C. 102 and 103 (or as subject to pre-AIA 35 U.S.C. 102 and 103) is incorrect, any correction of the statutory basis for the rejection will not be considered a new ground of rejection if the prior art relied upon, and the rationale supporting the rejection, would be the same under either status. The following is a quotation of the appropriate paragraphs of 35 U.S.C. 102 that form the basis for the rejections under this section made in this Office action: A person shall be entitled to a patent unless – (a)(1) the claimed invention was patented, described in a printed publication, or in public use, on sale, or otherwise available to the public before the effective filing date of the claimed invention. (a)(2) the claimed invention was described in a patent issued under section 151, or in an application for patent published or deemed published under section 122(b), in which the patent or application, as the case may be, names another inventor and was effectively filed before the effective filing date of the claimed invention. Claim 7 is rejected under 35 U.S.C. 102(a)(1) and 102(a)(2) as being anticipated by US 2010/022759 to Yamauchi (published 2010, PTO-892). Yamauchi teaches aninlonaphthalenesulfonic acid, PNG media_image6.png 134 177 media_image6.png Greyscale in water, ([0071]; additionally, [0016]-[0017], [0076]-[0077]). Claim 9 is rejected under 35 U.S.C. 102(a)(1) and 102(a)(2) as being anticipated by WO 2012/027392 to Hansen (published 2012, PTO-892). Hansen teaches pharmaceutical compositions comprising: PNG media_image8.png 96 157 media_image8.png Greyscale (pg. 75, claim 135) and specifically teaches C-15 as a species of PNG media_image8.png 96 157 media_image8.png Greyscale : PNG media_image9.png 298 567 media_image9.png Greyscale (pg. 43). Claim Rejections - 35 USC § 103 In the event the determination of the status of the application as subject to AIA 35 U.S.C. 102 and 103 (or as subject to pre-AIA 35 U.S.C. 102 and 103) is incorrect, any correction of the statutory basis for the rejection will not be considered a new ground of rejection if the prior art relied upon, and the rationale supporting the rejection, would be the same under either status. The following is a quotation of 35 U.S.C. 103 which forms the basis for all obviousness rejections set forth in this Office action: A patent for a claimed invention may not be obtained, notwithstanding that the claimed invention is not identically disclosed as set forth in section 102, if the differences between the claimed invention and the prior art are such that the claimed invention as a whole would have been obvious before the effective filing date of the claimed invention to a person having ordinary skill in the art to which the claimed invention pertains. Patentability shall not be negated by the manner in which the invention was made. The factual inquiries for establishing a background for determining obviousness under 35 U.S.C. 103 are summarized as follows: 1. Determining the scope and contents of the prior art. 2. Ascertaining the differences between the prior art and the claims at issue. 3. Resolving the level of ordinary skill in the pertinent art. 4. Considering objective evidence present in the application indicating obviousness or nonobviousness. This application currently names joint inventors. In considering patentability of the claims the examiner presumes that the subject matter of the various claims was commonly owned as of the effective filing date of the claimed invention(s) absent any evidence to the contrary. Applicant is advised of the obligation under 37 CFR 1.56 to point out the inventor and effective filing dates of each claim that was not commonly owned as of the effective filing date of the later invention in order for the examiner to consider the applicability of 35 U.S.C. 102(b)(2)(C) for any potential 35 U.S.C. 102(a)(2) prior art against the later invention. Claims 9-10 are rejected under 35 U.S.C. 103 as being unpatentable over WO 2012/027392 to Hansen (published 2012, PTO-892). Hansen is applied to claim 9 as discussed above. While Hansen teaches a pharmaceutical composition comprising benzyl 6-(furan-2-yl)-3-methyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-2-carboxylate, it differs from that of instant claim 10 in that it does not teach administering the compound to a mammalian cancer cell exposed to the chemotherapeutic agent. Hansen teaches a method of preventing or treating cancer by administering a composition comprising PNG media_image8.png 96 157 media_image8.png Greyscale (pg. 78, claim 156). Hansen teaches its patients as mammals. Hansen teaches that its compounds can be administered with other anti-cancer agents, such cisplatin and other chemotherapeutics (pg. 44). It would have been prima facie obvious to one of ordinary skill in the art, prior to the effective filing date of the instantly claimed invention to add a chemotherapeutic agent to the composition of Hansen comprising compound C-15, to arrive at instant claim 10. One of ordinary skill in the art would have been motivated to make such an addition, with a reasonable expectation of success, because Hansen teaches that chemotherapeutics can be added to its compositions for the prevention or treatment of cancer. An artisan having ordinary skill in the art would have been motivated to make such an addition to predictably arrive at a more therapeutically potent method of treating cancer. While Hansen does not teach “A method of increasing effectiveness of a chemotherapeutic agent,” the method of Hansen teaches administering to a mammalian cancer cell, a composition comprising both the instantly claimed composition and a chemotherapeutic.” As such, since instant claim 10 and Hansen teach administering the same composition to the same patient population, it would reasonably be expected that the method of Hansen increases the effectiveness of the chemotherapeutic. See MPEP 2112.02. Allowable Claims & Claims Free of the Prior Art Claims 1, 3, and 5 are allowed. Claims 2, 4, 6 and 8 are free of the prior art. The closest prior art to claims 1-2 is Campbell (The Use of BenzoPhenone as a Photoaffinity Label. Labeling in p-Benzoylphenylacetyl chymotrypsin at Unit Efficiency, Photochem and Photobio, published 1979)), which teaches: PNG media_image10.png 196 356 media_image10.png Greyscale (pg. 884, Col. 2, “Results”). However, Campbell does not teach a methyl on the middle phenyl ring and does not teach NO2 at the 2 position of the phenoxy ring, and further does not teach a pharmaceutical composition comprising this compound, let alone a method of administering the composition to a mammalian cancer cell exposed to a chemotherapeutic agent, which are the distinct features of the instantly claimed composition. The closest prior art to claims 3-4 is STN File Registry, RN 483293-23-8 (Entered STN, 01/30/2003, PTO-892). STN teaches: PNG media_image4.png 166 436 media_image4.png Greyscale However, STN Registry File does not teach a pharmaceutical composition comprising this compound, let alone a method of administering the composition to a mammalian cancer cell exposed to a chemotherapeutic agent, which are the distinct features of the instantly claimed composition. The closest prior art to claims 5-6 is STN File Registry, RN 694475-06-4 (Entered STN on 06/17/2004, PTO-892), which teaches: PNG media_image5.png 162 264 media_image5.png Greyscale However, STN Registry File does not teach a pharmaceutical composition comprising this compound, let alone a method of administering the composition to a mammalian cancer cell exposed to a chemotherapeutic agent, which are the distinct features of the instantly claimed composition. The closest prior art to claim 8 is US 2010/022759 to Yamauchi (published 2010, PTO-892). While Yamauchi teaches aninlonaphthalenesulfonic acid, PNG media_image6.png 134 177 media_image6.png Greyscale in water, ([0071]; additionally, [0016]-[0017], [0076]-[0077]), it does not teach a method of administering the composition to a mammalian cancer cell exposed to a chemotherapeutic agent, which are the distinct features of the instantly claimed method. Conclusion Claims 1, 3, and 5 are allowed. Claims 2, 4 and 6-10 are rejected. Any inquiry concerning this communication or earlier communications from the examiner should be directed to LAUREN WELLS whose telephone number is (571)272-7316. The examiner can normally be reached M-F 7:00-4:30. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, James (Jim) Alstrum-Acevedo can be reached on 571-272-5548. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. /LAUREN WELLS/Examiner, Art Unit 1622
Read full office action

Prosecution Timeline

Mar 27, 2023
Application Filed
Nov 16, 2025
Non-Final Rejection — §102, §103, §112 (current)

Precedent Cases

Applications granted by this same examiner with similar technology

Patent 12599608
METHODS FOR TREATING CARDIAC VALVE DISEASE
2y 5m to grant Granted Apr 14, 2026
Patent 12576102
METHODS FOR IDENTIFYING PRE-DISPOSITION TO COGNITIVE DECLINE AND AGENTS FOR REDUCING OR PREVENTING COGNITIVE DECLINE, OR IMPROVING COGNITIVE ABILITY
2y 5m to grant Granted Mar 17, 2026
Patent 12559486
TAU-PROTEIN TARGETING COMPOUNDS AND ASSOCIATED METHODS OF USE
2y 5m to grant Granted Feb 24, 2026
Patent 12544357
COMPOSITIONS AND METHODS FOR THE TREATMENT OF PLASMODIUM FALCIPARUM MALARIA
2y 5m to grant Granted Feb 10, 2026
Patent 12539296
MONTELUKAST FOR THE TREATMENT OF EROSIVE HAND OSTEOARTHRITIS
2y 5m to grant Granted Feb 03, 2026
Study what changed to get past this examiner. Based on 5 most recent grants.

AI Strategy Recommendation

Get an AI-powered prosecution strategy using examiner precedents, rejection analysis, and claim mapping.
Powered by AI — typically takes 5-10 seconds

Prosecution Projections

1-2
Expected OA Rounds
43%
Grant Probability
99%
With Interview (+57.8%)
2y 11m
Median Time to Grant
Low
PTA Risk
Based on 213 resolved cases by this examiner. Grant probability derived from career allow rate.

Sign in with your work email

Enter your email to receive a magic link. No password needed.

Personal email addresses (Gmail, Yahoo, etc.) are not accepted.

Free tier: 3 strategy analyses per month