Prosecution Insights
Last updated: October 04, 2026
Application No. 18/499,944

METHODS FOR BIOMOLECULE ANALYSIS EMPLOYING MULTI-COMPONENT DETECTION AGENT AND RELATED KITS

Non-Final OA §102§103
Filed
Nov 01, 2023
Priority
Nov 02, 2022 — provisional 63/421,932
Examiner
LANKFORD JR, LEON B
Art Unit
1657
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
Encodia Inc.
OA Round
1 (Non-Final)
70%
Grant Probability
Favorable
1-2
OA Rounds
9m
Est. Remaining
99%
With Interview

Examiner Intelligence

Grants 70% — above average
70%
Career Allowance Rate
526 granted / 751 resolved
+10.0% vs TC avg
Strong +32% interview lift
Without
With
+31.6%
Interview Lift
resolved cases with interview
Typical timeline
3y 8m
Avg Prosecution
47 currently pending
Career history
772
Total Applications
across all art units

Statute-Specific Performance

§101
6.5%
-33.5% vs TC avg
§103
43.2%
+3.2% vs TC avg
§102
14.4%
-25.6% vs TC avg
§112
26.7%
-13.3% vs TC avg
Black line = Tech Center average estimate • Based on career data from 751 resolved cases

Office Action

§102 §103
DETAILED ACTION Notice of Pre-AIA or AIA Status The present application, filed on or after March 16, 2013, is being examined under the first inventor to file provisions of the AIA . Election/Restrictions Applicant’s election without traverse of Group I and SEQ ID No 5 in the reply filed on 6/4/26 is acknowledged. Claim Rejections - 35 USC § 102 In the event the determination of the status of the application as subject to AIA 35 U.S.C. 102 and 103 (or as subject to pre-AIA 35 U.S.C. 102 and 103) is incorrect, any correction of the statutory basis (i.e., changing from AIA to pre-AIA ) for the rejection will not be considered a new ground of rejection if the prior art relied upon, and the rationale supporting the rejection, would be the same under either status. The following is a quotation of the appropriate paragraphs of 35 U.S.C. 102 that form the basis for the rejections under this section made in this Office action: A person shall be entitled to a patent unless – (a)(1) the claimed invention was patented, described in a printed publication, or in public use, on sale, or otherwise available to the public before the effective filing date of the claimed invention. (a)(2) the claimed invention was described in a patent issued under section 151, or in an application for patent published or deemed published under section 122(b), in which the patent or application, as the case may be, names another inventor and was effectively filed before the effective filing date of the claimed invention. Claims 1, 5-20 & 22 are rejected under 35 U.S.C. 102(a)(1)(2) as being anticipated by Dickinson et al (20200332371) Dickinson teaches a method of using a split RNAP to produce transcripts and analyzing the transcripts. They teach creating a transcription mixture: i) a first polymerase domain attached to a first interaction component; ii) a second polymerase domain attached to a second interaction component; iii) a nucleic acid construct comprising a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second interaction components interact, wherein the first and second polymerase domains are truncated portions of a polymerase; b) assaying for expression of the reporter gene [014]. Dickinson teaches methods for screening for modifications to the interaction of a first and second target by a candidate molecule, comprising: (a) attaching a first polymerase domain to the first target and attaching a second polymerase domain to the second target, wherein the first and second polymerase domains are truncated portions of a polymerase; (b) incubating the candidate molecule with (i) the first polymerase domain attached to the first target; (ii) the second polymerase domain attached to the second target; (iii) a nucleic acid construct comprising a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second targets interact, and (c) analyzing expression of the reporter gene relative to a control. In some embodiments, step a) is omitted. [0018] The reporter gene may be enzymatic, luminescent, color-producing, electrical, radioactive, or fluorescent. In certain embodiments, a reporter gene encodes a luciferase protein. In other embodiments, a reporter gene encodes a RNA nanostructure, an mRNA encoding a reporter protein or an RNAi. [0024] Dickinson also teaches a method of screening (a) incubating one or more candidate agents with (i) a first polymerase domain attached to the first interaction component; (ii) a second polymerase domain attached to a second interaction component; (iii) a nucleic acid readout construct responsive to polymerase activity from the first and second polymerase domains when the first and second components interact, and (b) analyzing the readout from the nucleic acid readout construct relative to a control. In some embodiments, the nucleic acid readout construct comprises a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second targets interact. A candidate inhibitor is identified if the readout indicates the candidate agent is reducing or interfering with the first and second polymerase domains from coming together to generate polymerase activity or function.[0032] The reference anticipates the claim subject matter. Claim Rejections - 35 USC § 103 In the event the determination of the status of the application as subject to AIA 35 U.S.C. 102 and 103 (or as subject to pre-AIA 35 U.S.C. 102 and 103) is incorrect, any correction of the statutory basis (i.e., changing from AIA to pre-AIA ) for the rejection will not be considered a new ground of rejection if the prior art relied upon, and the rationale supporting the rejection, would be the same under either status. The following is a quotation of 35 U.S.C. 103 which forms the basis for all obviousness rejections set forth in this Office action: A patent for a claimed invention may not be obtained, notwithstanding that the claimed invention is not identically disclosed as set forth in section 102, if the differences between the claimed invention and the prior art are such that the claimed invention as a whole would have been obvious before the effective filing date of the claimed invention to a person having ordinary skill in the art to which the claimed invention pertains. Patentability shall not be negated by the manner in which the invention was made. The factual inquiries for establishing a background for determining obviousness under 35 U.S.C. 103 are summarized as follows: 1. Determining the scope and contents of the prior art. 2. Ascertaining the differences between the prior art and the claims at issue. 3. Resolving the level of ordinary skill in the pertinent art. 4. Considering objective evidence present in the application indicating obviousness or nonobviousness. This application currently names joint inventors. In considering patentability of the claims the examiner presumes that the subject matter of the various claims was commonly owned as of the effective filing date of the claimed invention(s) absent any evidence to the contrary. Applicant is advised of the obligation under 37 CFR 1.56 to point out the inventor and effective filing dates of each claim that was not commonly owned as of the effective filing date of the later invention in order for the examiner to consider the applicability of 35 U.S.C. 102(b)(2)(C) for any potential 35 U.S.C. 102(a)(2) prior art against the later invention. Claims 1-20 & 22 are rejected under 35 U.S.C. 103 as being unpatentable over Dickinson et al (20200332371) & Golub et al (2007/0065844). Dickinson teaches a method of using a split RNAP to produce transcripts and analyzing the transcripts. They teach creating a transcription mixture: i) a first polymerase domain attached to a first interaction component; ii) a second polymerase domain attached to a second interaction component; iii) a nucleic acid construct comprising a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second interaction components interact, wherein the first and second polymerase domains are truncated portions of a polymerase; b) assaying for expression of the reporter gene [014]. Dickinson teaches methods for screening for modifications to the interaction of a first and second target by a candidate molecule, comprising: (a) attaching a first polymerase domain to the first target and attaching a second polymerase domain to the second target, wherein the first and second polymerase domains are truncated portions of a polymerase; (b) incubating the candidate molecule with (i) the first polymerase domain attached to the first target; (ii) the second polymerase domain attached to the second target; (iii) a nucleic acid construct comprising a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second targets interact, and (c) analyzing expression of the reporter gene relative to a control. In some embodiments, step a) is omitted. [0018] The reporter gene may be enzymatic, luminescent, color-producing, electrical, radioactive, or fluorescent. In certain embodiments, a reporter gene encodes a luciferase protein. In other embodiments, a reporter gene encodes a RNA nanostructure, an mRNA encoding a reporter protein or an RNAi. [0024] Dickinson also teaches a method of screening (a) incubating one or more candidate agents with (i) a first polymerase domain attached to the first interaction component; (ii) a second polymerase domain attached to a second interaction component; (iii) a nucleic acid readout construct responsive to polymerase activity from the first and second polymerase domains when the first and second components interact, and (b) analyzing the readout from the nucleic acid readout construct relative to a control. In some embodiments, the nucleic acid readout construct comprises a reporter gene under the control of a heterologous promoter responsive to polymerase activity from the first and second polymerase domains when the first and second targets interact. A candidate inhibitor is identified if the readout indicates the candidate agent is reducing or interfering with the first and second polymerase domains from coming together to generate polymerase activity or function.[0032] "[W]here the general conditions of a claim are disclosed in the prior art, it is not inventive to discover the optimum or workable ranges by routine experimentation." In re Aller, 220 F.2d 454, 456, 105 USPQ 233, 235 (CCPA 1955) (Claimed process which was performed at a temperature between 40°C and 80°C and an acid concentration between 25% and 70% was held to be prima facie obvious over a reference process which differed from the claims only in that the reference process was performed at a temperature of 100°C and an acid concentration of 10%.); >see also Peterson, 315 F.3d at 1330, 65 USPQ2d at 1382 ("The normal desire of scientists or artisans to improve upon what is already generally known provides the motivation to determine where in a disclosed set of percentage ranges is the optimum combination of percentages.");< ** In re Hoeschele, 406 F.2d 1403, 160 USPQ 809 (CCPA 1969) (Claimed elastomeric polyurethanes which fell within the broad scope of the references were held to be unpatentable thereover because, among other reasons, there was no evidence of the criticality of the claimed ranges of molecular weight or molar proportions.). For more recent cases applying this principle, see Merck & Co. Inc. v. Biocraft Laboratories Inc., 874 F.2d 804, 10 USPQ2d 1843 (Fed. Cir.), cert. denied, 493 U.S. 975 (1989); In re Kulling, 897 F.2d 1147, 14 USPQ2d 1056 (Fed. Cir. 1990); and In re Geisler, 116 F.3d 1465, 43 USPQ2d 1362 (Fed. Cir. 1997). Dickinson doesn’t teach a process using an analyte-specific barcode however it would have been obvious at the time the invention was made to use an analyte-specific barcode because Golub teaches using said barcodes in the production and detection of RNAs [0021] for optimization of the process [0165]. Applicant is directed to pages 12-13 of KSR v Teleflex (500 US 398 2007) “ … the Court has held that a “patent for a combination which only unites old elements with no change in their respective functions . . . obviously withdraws what is already known into the field of its monopoly and diminishes the resources available to skillful men.” Great Atlantic & Pacific Tea Co. v. Supermarket Equipment Corp., 340 U. S. 147, 152 (1950). This is a principal reason for declining to allow patents for what is obvious. The combination of familiar elements according to known methods is likely to be obvious when it does no more than yield predictable results.” “When a work is available in one field of endeavor, design incentives and other market forces can prompt variations of it, either in the same field or a different one(emphasis added). If a person of ordinary skill can implement a predictable variation, §103 likely bars its patentability. For the same reason, if a technique has been used to improve one device, and a person of ordinary skill in the art would recognize that it would improve similar devices in the same way, using the technique is obvious unless its actual application is beyond his or her skill.” Accordingly, the claimed invention was prima facie obvious to one of ordinary skill in the art at the time the invention was filed especially in the absence of evidence to the contrary. Any inquiry concerning this communication or earlier communications from the examiner should be directed to BLAINE LANKFORD whose telephone number is (571)272-0917. The examiner can normally be reached M-Th 8-6:30. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, Louise Humphrey can be reached at 571-272-5543. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. BLAINE LANKFORD Examiner Art Unit 1657 /BLAINE LANKFORD/Primary Examiner, Art Unit 1657
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Prosecution Timeline

Nov 01, 2023
Application Filed
Sep 01, 2026
Non-Final Rejection mailed — §102, §103 (current)

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Study what changed to get past this examiner. Based on 5 most recent grants.

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Prosecution Projections

1-2
Expected OA Rounds
70%
Grant Probability
99%
With Interview (+31.6%)
3y 8m (~9m remaining)
Median Time to Grant
Low
PTA Risk
Based on 751 resolved cases by this examiner. Grant probability derived from career allowance rate.

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