Prosecution Insights
Last updated: August 06, 2026
Application No. 18/548,865

METHODS AND SYSTEMS FOR DIAGNOSIS, CLASSIFICATION, AND TREATMENT OF SMALL CELL LUNG CANCER AND OTHER HIGH-GRADE NEUROENDOCRINE CARCINOMAS

Non-Final OA §103§112
Filed
Sep 01, 2023
Priority
Mar 03, 2021 — provisional 63/156,005 +2 more
Examiner
HANEY, AMANDA MARIE
Art Unit
1682
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
Board of Regents of the University of Texas System
OA Round
1 (Non-Final)
36%
Grant Probability
At Risk
1-2
OA Rounds
6m
Est. Remaining
81%
With Interview

Examiner Intelligence

Grants only 36% of cases
36%
Career Allowance Rate
260 granted / 712 resolved
-23.5% vs TC avg
Strong +44% interview lift
Without
With
+44.5%
Interview Lift
resolved cases with interview
Typical timeline
3y 5m
Avg Prosecution
60 currently pending
Career history
776
Total Applications
across all art units

Statute-Specific Performance

§101
23.3%
-16.7% vs TC avg
§103
23.2%
-16.8% vs TC avg
§102
10.2%
-29.8% vs TC avg
§112
32.8%
-7.2% vs TC avg
Black line = Tech Center average estimate • Based on career data from 712 resolved cases

Office Action

§103 §112
DETAILED ACTION Notice of Pre-AIA or AIA Status 1. The present application, filed on or after March 16, 2013, is being examined under the first inventor to file provisions of the AIA . 2. Applicant’s election without traverse of Group I in the reply filed on February 20, 2026 is acknowledged. Additionally Applicants elected DLL3-targeted therapy (Species I) and cg20728514 (Species II). It is noted that cg20728514 appears in Tables 1-3 in the Specification. Claims 1, 44, 54, 56, 229, 433, 443, 449, 460, and 470 are currently pending. Claims 229, 433, 443, 449, 460, and 470 are withdrawn from further consideration pursuant to 37 CFR 1.142(b) as being drawn to nonelected subject matter (either a nonelected invention or nonelected species), there being no allowable generic or linking claim. Election was made without traverse in the reply filed on February 20, 2026. Applicants are reminded that for any amendment being filed in response to a restriction or election of species requirement and any subsequent amendment, any claims which are non elected must have the status identifier (withdrawn). In response to this Office Action Applicants should indicate the current status of each claim. The claims have been examined to the extent that the claims read on the elected therapy (DLL3-targeted therapy) and the elected methylation site (cg20728514). The additionally recited therapies and methylation sites have been withdrawn from consideration as being directed to nonelected subject matter. Prior to allowance of the claim, any nonelected subject matter that is not rejoined with any allowed elected subject matter will be required to be removed from the claims. Claim Rejections - 35 USC § 112(b) 3. The following is a quotation of 35 U.S.C. 112(b): (b) CONCLUSION.—The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the inventor or a joint inventor regards as the invention. The following is a quotation of 35 U.S.C. 112 (pre-AIA ), second paragraph: The specification shall conclude with one or more claims particularly pointing out and distinctly claiming the subject matter which the applicant regards as his invention. Claims 1, 44, 54, and 56 are rejected under 35 U.S.C. 112(b) or 35 U.S.C. 112 (pre-AIA ), second paragraph, as being indefinite for failing to particularly point out and distinctly claim the subject matter which the inventor or a joint inventor (or for applications subject to pre-AIA 35 U.S.C. 112, the applicant), regards as the invention. Claims 1, 44, 54, and 56 are objected to for referring to specific figures and/or tables in the specification. MPEP 2173.05(s) states that “Where possible claims are to be complete in themselves. Incorporation by reference to a specific figure or table “is permitted only in exceptional circumstances where there is no practical way to define the invention in words and where it is more concise to incorporate by reference than duplicating a drawing or table into a claim. Incorporation by reference is a necessity doctrine, not for applicant’s convenience.” Claim Rejections - 35 USC § 112(a) 4. The following is a quotation of the first paragraph of 35 U.S.C. 112(a): (a) IN GENERAL.—The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor or joint inventor of carrying out the invention. The following is a quotation of the first paragraph of pre-AIA 35 U.S.C. 112: The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor of carrying out his invention. Claims 1, 44, 54, and 56 are rejected under 35 U.S.C. 112(a) or 35 U.S.C. 112 (pre-AIA ), first paragraph, as failing to comply with the written description requirement. The claim(s) contains subject matter which was not described in the specification in such a way as to reasonably convey to one skilled in the relevant art that the inventor or a joint inventor, or for applications subject to pre-AIA 35 U.S.C. 112, the inventor(s), at the time the application was filed, had possession of the claimed invention. The instant claims encompass treating a subject for small cell lung cancer (SCLC) by administering a DLL3-targeted therapy. The claims do not define the DLL3-targeted therapies in terms of their complete structure or any other relevant identifying characteristics. The claimed DLL3-targeted therapy can be an antibody, protein, peptide, small molecule, an inhibitory RNA molecule (e.g., siRNA, shRNA, ribozymes, and antisense oligonucleotides), a vaccine, or a pharmaceutical. The specification (para 0082 of the PG-PUB) teaches the following: In some embodiments, the subject is administered a DLL3-targeted therapeutic. A DLL3-targeted therapeutic, as used herein, describes any agent, molecule, or compound capable of binding to a DLL3 protein and having therapeutic properties in treating cancer, including small cell lung cancer such as SCLC-A. In some embodiments, the DLL3-targeted therapeutic is an anti-DLL3 antibody or fragment thereof. In some embodiments, the DLL3-targeted therapeutic is rovalpituzumab. In some embodiments, the DLL3-targeted therapeutic is an antibody-drug conjugate. In some embodiments, the DLL3-targeted therapeutic is rovalpituzumab tesirine. In some embodiments, the DLL3-targeted therapeutic is a DLL3-targeted cellular therapy. DLL3-targeted cellular therapies include any cell-based therapeutic capable of binding to DLL3. A DLL3-targeted therapeutic may be an immune cell capable of targeting DLL3-expressing cells, for example, via expression of a DLL3-binding agent such as a DLL3-targeted chimeric antigen receptor (CAR) or T cell receptor (TCR). In some embodiments, the DLL3-targeted cellular therapy is a DLL3-targeted CAR T cell. In some embodiments, the DLL3-targeted cellular therapy is a DLL3-targeted CAR NK cell. The specification discloses a single particular DLL3-targeted therapeutic (namely rovalpituzumab). The disclosure of a single particular DLL3-targeted therapeutic is insufficient to demonstrate possession of the genus as a whole. The breadth of the claims encompasses DLL3-targeted therapies which the present inventors were not in the possession of, or which were not known to the inventors. The instant disclosure does not allow one of skill in the art to visualize or recognize the structure of additional DLL3-targeted therapies that could be used to practice the claimed method. Therefore, the claims fail to meet the written description requirement because the claims encompass a significantly large genus of DLL3-targeted therapies which are not adequately described in the specification. Claim Rejections - 35 USC § 103 5. The following is a quotation of 35 U.S.C. 103 which forms the basis for all obviousness rejections set forth in this Office action: A patent for a claimed invention may not be obtained, notwithstanding that the claimed invention is not identically disclosed as set forth in section 102, if the differences between the claimed invention and the prior art are such that the claimed invention as a whole would have been obvious before the effective filing date of the claimed invention to a person having ordinary skill in the art to which the claimed invention pertains. Patentability shall not be negated by the manner in which the invention was made. 6. Claims 1, 54 and 56 are rejected under 35 U.S.C. 103 as being unpatentable over Owen (Journal of Hematology & Oncology 2019 12:61) in view of GSE66298 ( GEO Accession GSE66298 Pub 7/14/2015 found online at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE66298). Owen teaches that DLL3 is being explored as a potential therapeutic target in SCLC. Owen discloses three DLL3-specific therapies being developed for the treatment of SCLC: the antibody-drug conjugate rovalpituzumab tesirine, the bispecific T cell engager immuno-oncology therapy AMG 757, and the chimeric antigen receptor T cell therapy AMG 119 (abstract). Owen describes ongoing clinical trials with these DLL3-targeted agents in SCLC (Table 1). Owen teaches that rovalpituzumab is DLL3-specific IgG1 monoclonal antibody that is administered along with chemotherapy (see, Table 1, page 2, col 2). Owen teaches that rovalpituzumab is being tested in the first line, second line, and maintenance settings (Table 1). Owen does not teach administering a DLL3- targeted therapy to a subject having tumor DNA with differential methylation at cg20728514. However GSE66298 discloses the methylation level of cg20728514 in 11 SCLC patient tumors. As shown in the screen shot below, subject GSM1619033 has a tumor with differential methylation of cg20828514 in comparison to the other SCLC subjects. PNG media_image1.png 486 730 media_image1.png Greyscale Accordingly, it would have been obvious to one of ordinary skill in the art before the effective filing date of the claimed invention to have administered a DLL3- targeted therapy to one the SCLC patients of GSE66298. In the instant case Owen discloses ongoing clinical trials testing DLL3- targeted therapy for the treatment of SCLC. Based on the teachings of Owen it would have been obvious to administer DLL3-targeted therapy to ANY subject with SCLC, including those which have differential methylation at cg20728514, for the benefit of further studying DLL3 as a potential therapeutic target in SCLC. 7. Claim 44 is rejected under 35 U.S.C. 103 as being unpatentable over Owen (Journal of Hematology & Oncology 2019 12:61) in view of GSE66298 ( GEO Accession GSE66298 Pub 7/14/2015 found online at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE66298) as applied to claim 1 above and in further view of Lissa (Transl Lung Cancer Research 2016 5(5):492-504). The teachings of Owen and GSE66298 are discussed above. The combined references do not teach a method wherein the tumor DNA is ctDNA. However Lissa teaches that molecular alterations found in the DNA of tumor cells, such as mutations, translocations and methylation, are reflected in DNA that is released from the tumor into the bloodstream. Thus, in recent years, circulating tumor DNA (ctDNA) has gained increasing attention as a noninvasive alternative to tissue biopsies and potential surrogate for the entire tumor genome (abstract). Accordingly, it would have been obvious to one of ordinary skill in the art before the effective filing date of the claimed invention to have modified the method of Owen and GSE66298 by administering a DLL3 targeted therapy to a subject having ctDNA with differential methylation at cg20728514. Based on the teachings of Lissa one of skill in the art would have been motivated to look at ctDNA since methylation differences in tumors are reflected in ctDNA and ctDNA can be obtained using less invasive methods. Improper Markush Grouping Rejection 8. Claims 1, 44, 54, and 56 are rejected on the basis that it contains an improper Markush grouping of alternatives. See In re Harnisch, 631 F.2d 716, 721-22 (CCPA 1980) and Ex parte Hozumi, 3 USPQ2d 1059, 1060 (Bd. Pat. App. & Int. 1984). A Markush grouping is proper if the alternatives defined by the Markush group (i.e., alternatives from which a selection is to be made in the context of a combination or process, or alternative chemical compounds as a whole) share a “single structural similarity” and a common use. A Markush grouping meets these requirements in two situations. First, a Markush grouping is proper if the alternatives are all members of the same recognized physical or chemical class or the same art-recognized class, and are disclosed in the specification or known in the art to be functionally equivalent and have a common use. Second, where a Markush grouping describes alternative chemical compounds, whether by words or chemical formulas, and the alternatives do not belong to a recognized class as set forth above, the members of the Markush grouping may be considered to share a “single structural similarity” and common use where the alternatives share both a substantial structural feature and a common use that flows from the substantial structural feature. See MPEP § 2117. The claims recite the following Markush group: one or more methylation sites selected from the methylation sites of Table 2, Table 7, Table 15, Table 20, and Table 27. The Markush grouping is improper because the alternatives defined by the Markush grouping do not share both a single structural similarity and a common use for the following reasons: MPEP 2117(II) states that “A Markush claim may be rejected under judicially approved “improper Markush grouping” principles when the claim contains an improper grouping of alternatively useable members. A Markush claim contains an “improper Markush grouping” if either: (1) the members of the Markush group do not share a “single structural similarity” or (2) the members do not share a common use. Supplementary Guidelines at 7166 (citing In re Harnisch, 631 F.2d 716, 721-22, 206 USPQ 300, 305 (CCPA 1980)). MPEP 2117(II) further state that alternatives (1) share a “single structural similarity” when they belong to the same recognized physical or chemical class or to the same art-recognized class and (2) share a common function or use when they are disclosed in the specification or known in the art to be functionally equivalent in the context of the claimed invention. MPEP § 2117(II)(A) states that “A recognized physical class, a recognized chemical class, or an art-recognized class is a class wherein “there is an expectation from the knowledge in the art that members of the class will behave in the same way in the context of the claimed invention. In other words, each member could be substituted one for the other, with the expectation that the same intended result would be achieved”. Herein the members of the Markush grouping are all methylation sites. These do not belong to the same recognized physical or chemical class or to the same art-recognized class because there is no expectation from the art that each of the recited methylation sites would function in the same way in the claimed method. It is only in the context of this specification that it was disclosed that all members of this group may behave in the same way in the context of the claimed invention. MPEP § 2117(II)(B) states that “Where a Markush grouping describes alternative chemical compounds, whether by words or chemical formulas, and the alternatives do not belong to a recognized class as explained in subsection IIA above, the members of the Markush grouping may still be considered to be proper where the alternatives share a substantial structure feature that is essential to a common use. Again the members of the Markush grouping are all methylation sites. While they are all made up of a nucleotide that is potentially methylated and flanked by additional nucleotides, this structure is not essential to any asserted common use. To overcome this rejection, Applicant may set forth each alternative (or grouping of patentably indistinct alternatives) within an improper Markush grouping in a series of independent or dependent claims and/or present convincing arguments that the group members recited in the alternative within a single claim in fact share a single structural similarity as well as a common use. 9. Any inquiry concerning this communication or earlier communications from the examiner should be directed to AMANDA HANEY whose telephone number is (571)272-8668. The examiner can normally be reached Monday-Friday, 8:15am-4:45pm EST. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, Wu-Cheng Shen can be reached at 571-272-3157. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. /AMANDA HANEY/Primary Examiner, Art Unit 1682
Read full office action

Prosecution Timeline

Sep 01, 2023
Application Filed
May 01, 2026
Non-Final Rejection mailed — §103, §112 (current)

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Prosecution Projections

1-2
Expected OA Rounds
36%
Grant Probability
81%
With Interview (+44.5%)
3y 5m (~6m remaining)
Median Time to Grant
Low
PTA Risk
Based on 712 resolved cases by this examiner. Grant probability derived from career allowance rate.

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