Prosecution Insights
Last updated: October 02, 2026
Application No. 18/839,801

MARKERS ASSOCIATED WITH SPONTANEOUS CHROMOSOME DOUBLING

Final Rejection §112
Filed
Aug 20, 2024
Priority
Feb 23, 2022 — CN PCT/CN2022/077351 +1 more
Examiner
KRUSE, DAVID H
Art Unit
1663
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
Syngenta AG
OA Round
2 (Final)
81%
Grant Probability
Favorable
3-4
OA Rounds
4m
Est. Remaining
91%
With Interview

Examiner Intelligence

Grants 81% — above average
81%
Career Allowance Rate
1120 granted / 1377 resolved
+21.3% vs TC avg
Moderate +10% lift
Without
With
+9.6%
Interview Lift
resolved cases with interview
Typical timeline
2y 5m
Avg Prosecution
29 currently pending
Career history
1408
Total Applications
across all art units

Statute-Specific Performance

§101
4.9%
-35.1% vs TC avg
§103
25.1%
-14.9% vs TC avg
§102
12.0%
-28.0% vs TC avg
§112
43.4%
+3.4% vs TC avg
Black line = Tech Center average estimate • Based on career data from 1377 resolved cases

Office Action

§112
Status of the Application This Office Action is in response to the Amendment and Remarks filed 6 July 2026. The objections to the Specification are withdrawn in view of Applicant’s amendments. The rejection under 35 U.S.C. 112(b) is withdrawn because the metes and bounds of SEQ ID NO: 6 and SEQ ID NO: 7 are defined. Election/Restrictions Claims 1-3 and 11-20 remain withdrawn from further consideration pursuant to 37 CFR 1.142(b) as being drawn to a nonelected invention, there being no allowable generic or linking claim. Election was made without traverse in the reply filed on 6 February 2026. Applicant is reminded that upon the cancelation of claims to a non-elected invention, the inventorship must be corrected in compliance with 37 CFR 1.48(a) if one or more of the currently named inventors is no longer an inventor of at least one claim remaining in the application. A request to correct inventorship under 37 CFR 1.48(a) must be accompanied by an application data sheet in accordance with 37 CFR 1.76 that identifies each inventor by his or her legal name and by the processing fee required under 37 CFR 1.17(i). Claim Rejections - 35 USC § 112 The following is a quotation of the first paragraph of 35 U.S.C. 112(a): (a) IN GENERAL.—The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor or joint inventor of carrying out the invention. The following is a quotation of the first paragraph of pre-AIA 35 U.S.C. 112: The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor of carrying out his invention. Claims 4-10 remain rejected under 35 U.S.C. 112(a) or 35 U.S.C. 112 (pre-AIA ), first paragraph, as failing to comply with the written description requirement. The claim(s) contains subject matter which was not described in the specification in such a way as to reasonably convey to one skilled in the relevant art that the inventor or a joint inventor, or for applications subject to pre-AIA 35 U.S.C. 112, the inventor(s), at the time the application was filed, had possession of the claimed invention. Applicant claims a method of obtaining a spontaneously double haploid plant using a maize plant comprising SCD-QTL1 comprising SEQ ID Nos: 6 and 7 that is [are] associated with spontaneous chromosome doubling. Instant SEQ ID NO: 6 comprises 44 x 2 variants and instant SEQ ID NO: 7 comprises 244 variants. Applicant describes maize lines SYN004 and SYN007 that produce a high percentage of fertile haploids that can undergo spontaneous chromosome doubling to produce double haploid progeny in Table 1, paragraph [0083]. Applicant does not describe any structure that produces spontaneous chromosome doubling, only the SCD-QTL1 that is “associated with spontaneous chromosome doubling”. It is unclear which variant of instant SEQ ID NO: 6 and SEQ ID NO: 7 would actually describe an association with said SCD-QTL1. Further, it is unclear if maize lines SYN004 and SYN007 would be readily available. Hence, it is unclear that Applicant was in possession of the invention as broadly claimed. See also, MPEP § 2163 which states that the claimed invention as a whole may not be adequately described where an invention is described solely in terms of a method of its making coupled with its function and there is no described or art-recognized correlation or relationship between the structure of the invention and its function. A biomolecule sequence described only by a functional characteristic, without any known or disclosed correlation between that function and the structure of the sequence, normally is not a sufficient identifying characteristic for written description purposes, even when accompanied by a method of obtaining the claimed sequence. Applicant argues that the specification describes, "SCD-QTL1" refers to the presently identified QTL on chromosome 7, which "is defined by the region of chromosome 7 flanked by two markers, SM0077AQ and SM11142" and "[t]hese markers correspond to their physical locations in the B73_v4 reference genome." See paragraph [0034]. Applicant argues that two markers "flank a 2.54 Mb region (B73_v4 coordinates), containing 46 annotated gene models (pages 1-2 of the Remarks). Applicant’s arguments are not found persuasive. Table 4 of the Specification describe marker names and B73_v4 positions on chromosome 7, Table 6 describes primers used for markers SM0077AQ and SM11142. As addressed above, the degenerate markers SM0077AQ and SM11142 do not define a structure/function relationship for the “spontaneously doubled haploid plant” phenotype. Concerning the amendment to claim 4, the limitation “the B73_v4 reference genome” represents an improper incorporation by reference and thus the claim(s) lack proper written description. See 37 CFR 1.57(d). Claims 4-10 remain rejected under 35 U.S.C. 112(a) or 35 U.S.C. 112 (pre-AIA ), first paragraph, because the specification, while being enabling for a method of obtaining a spontaneously doubled haploid plant using maize lines SYN004 and SYN007, does not reasonably provide enablement for a method of obtaining a spontaneously double haploid plant using a maize plant comprising SCD-QTL1 comprising SEQ ID Nos: 6 and 7 that is [are] associated with spontaneous chromosome doubling. The specification does not enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the invention commensurate in scope with these claims. Applicant claims a method of obtaining a spontaneously double haploid plant using a maize plant comprising SCD-QTL1 comprising SEQ ID Nos: 6 and 7 that is [are] associated with spontaneous chromosome doubling. Instant SEQ ID NO: 6 comprises 44 x 2 variants and instant SEQ ID NO: 7 comprises 244 variants. Applicant teaches maize lines SYN004 and SYN007 that produce a high percentage of fertile haploids that can undergo spontaneous chromosome doubling to produce double haploid progeny in Table 1, paragraph [0083]. Applicant does not teach any structure that produces spontaneous chromosome doubling, only the SCD-QTL1 that is “associated with spontaneous chromosome doubling”. It is unclear which variant of instant SEQ ID NO: 6 and SEQ ID NO: 7 would actually teach an association with said SCD-QTL1. Further, it is unclear if maize lines SYN004 and SYN007 would be readily available. In re Wands, 858F.2d 731, 8 USPQ2d 1400 (Fed. Cir. 1988) lists eight considerations for determining whether or not undue experimentation would be necessary to practice an invention. These factors are: the quantity of experimentation necessary, the amount of direction or guidance presented, the presence or absence of working examples of the invention, the nature of the invention, the state of the prior art, the relative skill of those in the art, the predictability or unpredictability of the art, and the breadth of the claims. Instant SEQ ID NO: 6 comprises 44 x 2 variants and instant SEQ ID NO: 7 comprises 244 variants. The recited sequences include a vast genus of primers and combinations thereof. It is unclear from the instant Specification what primers were used to identify the SCD-QTL1 associated with spontaneous chromosome doubling were used. In addition, it is unclear where the germplasm SYN004 and SYN007 were derived from. Hence, given the limited guidance, nature of the invention, unpredictability of the art and the breadth of the claims it would have required undue trial and error experimentation to make and use the invention as broadly claimed. In Wyeth v. Abbott Laboratories, 107 USPQ2d 1273, at 1276-1277 (Fed. Cir. 2013), the court teaches that, the specification…discloses only a starting point for further iterative research in an unpredictable and poorly understood field, the resulting need to engage in a systematic screening process for each of the many rapamycin candidate compounds is excessive experimentation. The court thus held that there is no genuine dispute that practicing the full scope of the claims measured at the filing date, required undue experimentation. Applicant argues that they screened 20 lines for SCD and identified lines SYN004 and SYN007 as exhibiting SCD at rates of 100% and 96%, respectively. Example 3 provides detailed fine-mapping of the QTL boundaries using SNP-based TaqMan assay markers, with Table 4 listing the specific marker locations and Table 6 providing the DNA sequences for markers SM0077AQ and SM11142 that define SCD-QTL1, including the forward primers (SEQ ID NOs: 1, 3, and 4), reverse primers (SEQ ID NOs: 2 and 5), and target sequences (SEQ ID NOs: 6 and 7). Applicant argues that Examples 6 and 7 demonstrate QTL penetrance across diverse germplasm, with Table 7 showing phenotypic data from 17 elite inbred lines representing several heterotic groups. Applicant argues that the specification, and claims as amended herein, provides the specific chromosomal location, marker boundaries, physical positions, and primer sequences necessary to identify and select for SCD-QTL1 in any maize germplasm, thereby enabling one skilled in the art to practice the claimed methods without requiring access to these specific lines (pages 2-3 of the Remarks). Applicant’s arguments are not found persuasive. Example 1 screened lines known to have SCD (spontaneous chromosome doubling). Example 6 teaches screening backcross progeny of SYN004 (the QTL donor); hence this example uses a known line comprising the SCD-QTL1. Example 7 appears to use the same QTL donor. Applicant does not appear to teach which sequence of SEQ ID NO: 6 and SEQ ID NO: 7 are correlated with the SCD phenotype, or if identified lines SYN004 and SYN007 have different marker sequences. Further, Applicant does not teach what structure in the QTL actually produces the SCD phenotype. Hence, the rejection is maintained for the reasons of record. Conclusion Applicant's amendment necessitated the new ground(s) of rejection presented in this Office action. Accordingly, THIS ACTION IS MADE FINAL. See MPEP § 706.07(a). Applicant is reminded of the extension of time policy as set forth in 37 CFR 1.136(a). A shortened statutory period for reply to this final action is set to expire THREE MONTHS from the mailing date of this action. In the event a first reply is filed within TWO MONTHS of the mailing date of this final action and the advisory action is not mailed until after the end of the THREE-MONTH shortened statutory period, then the shortened statutory period will expire on the date the advisory action is mailed, and any nonprovisional extension fee (37 CFR 1.17(a)) pursuant to 37 CFR 1.136(a) will be calculated from the mailing date of the advisory action. In no event, however, will the statutory period for reply expire later than SIX MONTHS from the mailing date of this final action. No claims are allowed. Any inquiry concerning this communication or earlier communications from the examiner should be directed to DAVID H KRUSE whose telephone number is (571) 272-0799. The examiner can normally be reached Monday-Friday 7AM-3:30PM. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, Amjad Abraham can be reached on (571) 270-7058. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. /David H Kruse/ Primary Examiner, Art Unit 1663
Read full office action

Prosecution Timeline

Aug 20, 2024
Application Filed
Mar 12, 2026
Non-Final Rejection mailed — §112
Jun 05, 2026
Response after Non-Final Action
Jun 05, 2026
Response Filed
Jul 06, 2026
Response Filed
Sep 17, 2026
Final Rejection mailed — §112 (current)

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Prosecution Projections

3-4
Expected OA Rounds
81%
Grant Probability
91%
With Interview (+9.6%)
2y 5m (~4m remaining)
Median Time to Grant
Moderate
PTA Risk
Based on 1377 resolved cases by this examiner. Grant probability derived from career allowance rate.

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