Prosecution Insights
Last updated: May 29, 2026
Application No. 16/746,635

Modified plants and methods for reducing cell wall methylation and recalcitrance

Non-Final OA §112
Filed
Jan 17, 2020
Priority
Jul 17, 2017 — provisional 62/533,621 +1 more
Examiner
BYRNES, DAVID R
Art Unit
1662
Tech Center
1600 — Biotechnology & Organic Chemistry
Assignee
The Regents of the University of California
OA Round
7 (Non-Final)
80%
Grant Probability
Favorable
7-8
OA Rounds
0m
Est. Remaining
99%
With Interview

Examiner Intelligence

Grants 80% — above average
80%
Career Allowance Rate
180 granted / 226 resolved
+19.6% vs TC avg
Strong +21% interview lift
Without
With
+20.9%
Interview Lift
resolved cases with interview
Typical timeline
2y 4m
Avg Prosecution
29 currently pending
Career history
271
Total Applications
across all art units

Statute-Specific Performance

§101
0.8%
-39.2% vs TC avg
§103
32.1%
-7.9% vs TC avg
§102
17.9%
-22.1% vs TC avg
§112
38.1%
-1.9% vs TC avg
Black line = Tech Center average estimate • Based on career data from 226 resolved cases

Office Action

§112
Detailed action The present application, filed on or after March 16, 2013, is being examined under the first inventor to file provisions of the AIA . Claims 5-10, 12-13 and 15-18 are examined. Claims 5 and 16 are currently amended. Continued Examination Under 37 CFR 1.114 A request for continued examination under 37 CFR 1.114, including the fee set forth in 37 CFR 1.17(e), was filed in this application after final rejection. Since this application is eligible for continued examination under 37 CFR 1.114, and the fee set forth in 37 CFR 1.17(e) has been timely paid, the finality of the previous Office action has been withdrawn pursuant to 37 CFR 1.114. Applicant's submission filed on 2/9/2026 has been entered. Written Description The following is a quotation of the first paragraph of 35 U.S.C. 112(a): (a) IN GENERAL.—The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor or joint inventor of carrying out the invention. The following is a quotation of the first paragraph of pre-AIA 35 U.S.C. 112: The specification shall contain a written description of the invention, and of the manner and process of making and using it, in such full, clear, concise, and exact terms as to enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the same, and shall set forth the best mode contemplated by the inventor of carrying out his invention. Claims 5-13 and 15 remain rejected and claim 16 is rejected under 35 U.S.C. 112(a) or 35 U.S.C. 112 (pre-AIA ), first paragraph, as failing to comply with the written description requirement. The claim(s) contains subject matter which was not described in the specification in such a way as to reasonably convey to one skilled in the relevant art that the inventor or a joint inventor, or for applications subject to pre-AIA 35 U.S.C. 112, the inventor(s), at the time the application was filed, had possession of the claimed invention. Due to Applicant’s amendments of the claims, this rejection is modified from the rejection set forth in the Office action mailed 10/7/2025. Applicant claims a method of producing a cell wall by introducing a nucleotide sequence encoding a S-adenosylmethionine hydrolase (SAMH), also referred to as AdoMetase comprising SEQ ID NO: 1, operably linked to a tissue-specific secondary wall promoter resulting in increased expression of SAMH in a secondary cell wall synthesizing tissue resulting in a yield of 140 to 160 µg sugar per mg dry biomass, a 27-31% reduction of the lignin content and a decreased S-unit to G-unit ratio. Applicant claims the plant is Arabidopsis, Camelina, flax, poplar, eucalyptus, alfalfa, soy, hemp, rape or willow. Claim 16 is drawn to the method of claim 5 wherein the plant is Arabidopsis, Camelina, flax, poplar, pine, rape and willow Applicant describes transformation of Arabidopsis thaliana (paragraph 41) and poplar (paragraph 70), using a single SAMH gene expressed under the control of the IRX5 promoter (paragraph 41). Applicant describes the Arabidopsis plants comprised a yield of 140 to 160 µg sugar per mg dry biomass (Figure 5), a 27-31% decrease of lignin content (paragraph 57) and a decreased S-unit to G-unit ratio (Table 4). Applicant does not describe transformation of a plant with any other SAMH gene than the single coliphage T3 embodiment of a SAMH described (paragraph 39) wherein the SAMH gene encodes SEQ ID NO: 1 (paragraph 12) in any plant other than Arabidopsis and poplar. Applicant has not described the claimed functions in a plant other than Arabidopsis. Proteins identified as SAMH in the art comprise structural diversity including less than 60% identity with SEQ ID NO: 1 (GenBank accession QKM75930; see alignment below). While Applicant has limited the claimed invention to the method expressing a nucleic acid encoding SEQ ID NO: 1 specifically, the knowledge in the art does not indicate that SAMH would comprise the claimed functions when expressed under any plant as claims 5-15 are drawn to with the claimed genus of tissue-specific promoters as encompassed by claim 15 nor the Markush group of plants encompassed by claim 16. PNG media_image1.png 356 817 media_image1.png Greyscale The described embodiments are not representative of the breadth of the claimed genus such that one of ordinary skill in the art would be able to envision which members of the claimed genus possess the claimed functions. Given the breadth of the genera encompassed by the claims, the described species are not sufficiently representative. Applicant has not provided a structure-function relationship beyond a SAMH comprising the full length of SEQ ID NO: 1 expressed in poplar and Arabidopsis. Applicant has not described any other structures that would allow one to envision the SAMH protein being expressed in any plant nor in each of the members of the Markush group of plants in claim 16 sufficiently to comprise the claimed functions. Therefore, Applicant has not satisfied the written description requirement. Applicant’s arguments regarding rejection under 35 USC 112(a) for written description The arguments provided by Applicant in the Remarks filed 1/7/2026 have been fully considered but are not persuasive. Applicant argues on pages 6-7 of the Remarks that the specification, in paragraph 17, provides support for newly amended claim 1, a description of the plant being Arabidopsis, Camelina, flax, poplar, eucalyptus, alfalfa, soy, hemp, rape or willow. Applicant argues that the claimed embodiments are of related orders: Arabidopsis, rape and Camelina are Brassicales; poplar, flax and willow are Malpighales; alfalfa and soy are Fabales; and eucalyptus is of Rosales. This argument has been fully considered but it is not persuasive. The contemplation in the Specification referred to by Applicant is merely prophetic, and would not sufficiently demonstrate to one of ordinary skill in the art that Applicant had possession of the claimed invention considering the lack of working examples for all but Arabidopsis and poplar. Applicant notes on page 5 that claim 16 is amended to replace the Markush group of plants with “Arabidopsis or poplar”., including Arabidopsis, Camelina, flax, poplar, pine, rape and willow. This argument has been fully considered but is not persuasive. While the embodiments of Arabidopsis or poplar would be allowable, instant claim 16 of the claims filed 1/7/2026 encompasses the Markush group Arabidopsis, Camelina, flax, poplar, pine, rape and willow. Conclusion Claims 5-10, 12-13 and 15-16 remain rejected. Claims 17-18 remain allowed. Any inquiry concerning this communication or earlier communications from the examiner should be directed to DAVID R BYRNES whose telephone number is (571)270-3935. The examiner can normally be reached 9:00 - 5:00 M-F. Examiner interviews are available via telephone, in-person, and video conferencing using a USPTO supplied web-based collaboration tool. To schedule an interview, applicant is encouraged to use the USPTO Automated Interview Request (AIR) at http://www.uspto.gov/interviewpractice. If attempts to reach the examiner by telephone are unsuccessful, the examiner’s supervisor, Bratislav Stankovic can be reached at (571) 270-0305. The fax phone number for the organization where this application or proceeding is assigned is 571-273-8300. Information regarding the status of published or unpublished applications may be obtained from Patent Center. Unpublished application information in Patent Center is available to registered users. To file and manage patent submissions in Patent Center, visit: https://patentcenter.uspto.gov. Visit https://www.uspto.gov/patents/apply/patent-center for more information about Patent Center and https://www.uspto.gov/patents/docx for information about filing in DOCX format. For additional questions, contact the Electronic Business Center (EBC) at 866-217-9197 (toll-free). If you would like assistance from a USPTO Customer Service Representative, call 800-786-9199 (IN USA OR CANADA) or 571-272-1000. /DAVID R BYRNES/Examiner, Art Unit 1662
Read full office action

Prosecution Timeline

Show 11 earlier events
Dec 02, 2024
Response after Non-Final Action
Mar 05, 2025
Non-Final Rejection mailed — §112
Jun 05, 2025
Response Filed
Oct 07, 2025
Final Rejection mailed — §112
Jan 07, 2026
Response after Non-Final Action
Feb 09, 2026
Request for Continued Examination
Feb 11, 2026
Response after Non-Final Action
Apr 09, 2026
Non-Final Rejection mailed — §112 (current)

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Study what changed to get past this examiner. Based on 5 most recent grants.

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Prosecution Projections

7-8
Expected OA Rounds
80%
Grant Probability
99%
With Interview (+20.9%)
2y 4m (~0m remaining)
Median Time to Grant
High
PTA Risk
Based on 226 resolved cases by this examiner. Grant probability derived from career allowance rate.

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