Prosecution Insights
Last updated: October 01, 2026

Thermo Fisher Scientific

Technology areas: Biotechnology & Pharmaceuticals • Chemistry & Materials

77 pending office actions • 31 art units • 62 examiners • 0 of 77 (0%) have an AI response strategy ready • 78 patents granted in the last 365 days

Analysis

Thermo Fisher Scientific maintains 77 pending office actions within the Biotechnology & Pharmaceuticals technology area. These matters are distributed among 62 distinct examiners and 31 distinct art units. The high count of 62 distinct examiners relative to 77 pending office actions indicates that most examiners are overseeing a single application for the company, leading to a decentralized prosecution landscape.

JOSEPH G DAUNER is the busiest examiner with 4 pending actions. This concentration is low, as the 4 actions represent only a small portion of the 77 pending office actions. With 31 distinct art units involved, the company's prosecution strategy must account for a wide range of technical standards and examiner behaviors across the biotechnology sector. Navigating 31 distinct art units implies that the portfolio covers a diverse array of biological technologies.

Written from this page's own data; every figure is computed from USPTO records and verified before publication.

Portfolio Summary

77
Total Pending OAs
47
Non-Final OAs
27
Final Rejections
3
Advisory / Quayle

Response Deadline Pressure

Based on the USPTO statutory response window for each pending office action. 26 of the docket's apps have a known mailing date; the rest are excluded from the tile counts.

13
Overdue
1
Due this week
9
Due this month
2
Due in next 60 days
1
Due later

Deadline Fire Line

Every pending office action with a known statutory deadline, placed on a days-until-due axis. Dots left of Today are overdue; the further right, the more runway. Cases that share a deadline window stack vertically. 26 of the docket's apps have a known mailing date.

-30dToday30d60d90d120d
Overdue (13)Due ≤ 7 days (1)Due ≤ 30 days (9)Due ≤ 60 days (2)Due later (1)

Case Difficulty Mix

Difficulty is derived from the rejection statutes on the most recent pending office action. §101-driven and multi-statute cases are graded Hard; §112-only and obviousness-type double-patenting cases are graded Easy; everything else is Medium. "Unknown" means we have not yet parsed a statute for that office action.

53
Hard (69%)
18
Medium (23%)
6
Easy (8%)
0
Unknown (0%)

Rejection Statute Mix

BucketCases
§101 only2 (3%)
§101 + other17 (22%)
§103 only11 (14%)
§102 only2 (3%)
§112 only5 (6%)
Double-patenting only1 (1%)
Double-patenting + other5 (6%)
Multi-statute (no §101)34 (44%)

Industry Mix

How the docket's pending cases split across USPTO tech-center bands.

49
Life Sciences
64% of docket
2
Information Tech
3% of docket
0
Communications
0% of docket
2
Semiconductors
3% of docket
5
Mechanical / Eng
6% of docket
19
Business / Other
25% of docket

Time-on-OA Estimate

Manual office-action response work runs about 10 hours per case. The time-saved bands below show what IP Author's prosecution pipeline typically delivers — a conservative 20% on the low end, 35% in the middle, 50% on the high end.

770 h
Manual time on pending OAs
154 h
Time saved (low, 20%)
270 h
Time saved (mid, 35%)
6.7 wks
FTE-weeks freed (mid)

Top Examiners on this docket

ExaminerApps on this docketAllow rateInterview lift
DAUNER, JOSEPH G 4 56.9% +35.2%
GREENE, CAROLYN LEE 4 65.3% +47.3%
PEO, JONATHAN M 2 48.2% +48.1%
BOWERS, NATHAN ANDREW 2 59.4% +31.9%
PHAM, KHAI QUYNH TIEN 2 0.0% +0.0%
SCHULTZHAUS, JANNA NICOLE 2 35.1% +37.0%
HYUN, PAUL SANG HWA 2 69.8% +36.5%
WHALEY, PABLO S 2 25.1% +21.4%
FONSECA LOPEZ, FRANCINI ALVARENGA 2 29.6% +37.1%
BERTOGLIO, VALARIE E 2 64.1% +30.2%

Hard Cases (55)

Multi-statute / §101-driven matters, or cases in front of an examiner with an allow rate under 30%. The top 8 ordered by deadline are shown.

App #TitleExaminerDue in
18531920 METHODS FOR DETECTION OF FUSIONS USING COMPRESSED MOLECULAR TAGGED NUCLEIC ACID SEQUENCE DATA SCHULTZHAUS, JANNA NICOLE 85d overdue
18261812 COMPOSITIONS, KITS AND METHODS FOR DIRECT AMPLIFICATION FROM CRUDE BIOLOGICAL SAMPLES WOOLWINE, SAMUEL C 81d overdue
17553295 System and Method for Control of Sequencing Process FONSECA LOPEZ, FRANCINI ALVARENGA 73d overdue
17574032 UNIVERSAL REPORTER-BASED GENOTYPING METHODS AND MATERIALS MUMMERT, STEPHANIE KANE 45d overdue
18756372 Systems and Methods of Cell Sorting Implementing Artificial Intelligence BURKMAN, JESSICA LYNN 42d overdue
18441967 METHODS, SYSTEMS, AND COMPUTER-READABLE MEDIA FOR DETECTION OF TANDEM DUPLICATION LIU, GUOZHEN 30d overdue
18629059 FLUIDICS SYSTEMS FOR SEQUENTIAL DELIVERY OF REAGENTS DAUNER, JOSEPH G 25d overdue
17942887 ARRAY-BASED METHODS FOR ANALYSING MIXED SAMPLES USING DIFFERENTLY LABELLED ALLELE-SPECIFIC PROBES DAUNER, JOSEPH G 25d overdue

Interview Candidates (22)

Cases in front of an examiner whose interview lift is 10 percentage points or more — i.e. interviewed cases historically resolve more favorably than non-interviewed ones. The top 8 ordered by deadline are shown.

App #TitleExaminerDue in
18531920 METHODS FOR DETECTION OF FUSIONS USING COMPRESSED MOLECULAR TAGGED NUCLEIC ACID SEQUENCE DATA SCHULTZHAUS, JANNA NICOLE 85d overdue
17553295 System and Method for Control of Sequencing Process FONSECA LOPEZ, FRANCINI ALVARENGA 73d overdue
18629059 FLUIDICS SYSTEMS FOR SEQUENTIAL DELIVERY OF REAGENTS DAUNER, JOSEPH G 25d overdue
17942887 ARRAY-BASED METHODS FOR ANALYSING MIXED SAMPLES USING DIFFERENTLY LABELLED ALLELE-SPECIFIC PROBES DAUNER, JOSEPH G 25d overdue
18137956 Methods and Kits to Detect Viral Particle Heterogeneity GREENE, CAROLYN LEE 17d overdue
17226642 Hematopoietic Stem and Progenitor Cell Expansion System BERTOGLIO, VALARIE E 15d overdue
18067711 METHOD FOR THE SEPARATION OF ANIONIC, CATIONIC, NEUTRAL AND ZWITTERIONIC ARSENIC SPECIES PEO, JONATHAN M 2d overdue
18161546 METHODS OF DIFFERENTIATION TO NEURONAL CELLS AND KITS THEREFOR BERTOGLIO, VALARIE E 15d

Top Art Units

Art UnitApps
1681 9
1682 6
1684 5
1686 4
1685 3
1797 2
1779 2
1796 2
1632 2
1798 2

Pending Office Actions

App #TitleExaminerArt UnitStatutesStatusDue inAIFiled
19429723 NON-IONIC SURFACTANTS AND METHODS OF MAKING AND USING THE SAME BAHTA, MEDHANIT W 1692 §102§103§112 Final Rejection — Pending Dec 22, 2025
19040716 NEEDLE SUPPORT WITH INTEGRATED TUBING MANAGEMENT KELLY, TIMOTHY PATRICK 3753 §102§103 Non-Final OA — Pending Jan 29, 2025
18974353 OFF-PLOT GATE INDICATORS AND NAVIGATION TOOLS FOR CELL DATA ANALYSIS BLAUFELD, JUSTIN R — §102§103 Non-Final OA — Pending Dec 09, 2024
18956167 Methods And Systems For Dynamic Range Enhancement Of Fluorescence Detectors DOWNING, SAVANNAH STARR 2884 §102§103 Non-Final OA — Pending Nov 22, 2024
18957412 SYSTEMS AND METHODS FOR PARTICLE CLASSIFICATION USING MACHINE LEARNING ELLIOTT, JORDAN MCKENZIE — §102§103 Non-Final OA — Pending Nov 22, 2024
18792286 SYSTEMS AND METHODS FOR PROVIDING FLUIDIC ACCESS TO A FLOW CELL ALABI, OYELEYE A 1797 §103 Final Rejection — Pending Aug 01, 2024
18776608 METHODS AND SYSTEMS FOR ALIGNING DISPENSING ARRAYS WITH MICROFLUIDIC SAMPLE ARRAYS BOYER, RANDY — §103 Non-Final OA — Pending Jul 18, 2024
18756372 Systems and Methods of Cell Sorting Implementing Artificial Intelligence BURKMAN, JESSICA LYNN 3653 §101§112 Non-Final OA 42d overdue Pending Jun 27, 2024
18739087 MULTICHANNEL PIPETTE AND ELECTROPORATION SYSTEM KIPOUROS, HOLLY MICHAELA 2855 §102§103 Non-Final OA — Pending Jun 10, 2024
18675633 SYSTEM AND METHOD FOR PREPARATION OF NUCLEOTIDE SOLUTIONS DAUNER, JOSEPH G — §102§112DP Non-Final OA — Pending May 28, 2024
18672549 SYSTEMS AND METHODS FOR RUN-TIME SEQUENCING RUN QUALITY MONITORING WRIGHT, PATRICIA KATHRYN — §101DP Non-Final OA — Pending May 23, 2024
18706621 COMPOSITIONS AND METHODS FOR REDUCING MASTER MIX CONTAMINATION BAUER, BRIANNA LEE — §103§112DP Non-Final OA — Pending May 01, 2024
18642638 AUTOMATED CHROMATOGRAPHY SYSTEMS AND METHODS PRINCE JR, FREDDIE GARY — §102§103 Non-Final OA — Pending Apr 22, 2024
18636580 SYSTEM AND METHOD FOR AUTOMATED REPEAT SEQUENCING PARISI, JESSICA DANIELLE — §102§103Other Non-Final OA — Pending Apr 16, 2024
18629059 FLUIDICS SYSTEMS FOR SEQUENTIAL DELIVERY OF REAGENTS DAUNER, JOSEPH G 1682 §103§112 Final Rejection 25d overdue Pending Apr 08, 2024
18602164 Dialysis Devices And Sensor Caps And Systems And Methods Incorporating The Same PEO, JONATHAN M 1779 §103 Final Rejection — Pending Mar 12, 2024
18689952 SCALABLE SYSTEMS AND METHODS FOR CONTINUOUS TRANSFECTION OF CELLS HASSAN, LIBAN M — §102§103§112 Non-Final OA — Pending Mar 07, 2024
18689573 MASTER MIX COMPOSITIONS, KITS, AND METHODS BUCHANAN, BAILEY CHEYENNE — §102§103 Non-Final OA — Pending Mar 06, 2024
18441967 METHODS, SYSTEMS, AND COMPUTER-READABLE MEDIA FOR DETECTION OF TANDEM DUPLICATION LIU, GUOZHEN 1686 §101§103DPOther Final Rejection 30d overdue Pending Feb 14, 2024
18435956 ROOM-TEMPERATURE-STABLE CULTURE MEDIA AND SUPPLEMENTS WESTON, ALYSSA G 1633 §103§112 Final Rejection — Pending Feb 07, 2024
18294322 COMPOSITIONS, KITS, AND METHODS FOR DETECTION OF NUCLEIC ACID SEQUENCE LOADS GIAMMONA, FRANCESCA FILIPPA 1682 §102§103§112 Non-Final OA — Pending Feb 01, 2024
18399270 CELL CULTURE FLASK BOWERS, NATHAN ANDREW — §102§103 Non-Final OA — Pending Dec 28, 2023
18398730 Lipid Compositions and Methods for Delivery to Immune Cells KAMM, JUDITH MARIE 1611 §103§112 Non-Final OA — Pending Dec 28, 2023
18397280 OLIGONUCLEOTIDE-TETHERED NUCLEOTIDES PHAM, KHAI QUYNH TIEN 1684 §112DP Non-Final OA — Pending Dec 27, 2023
18531920 METHODS FOR DETECTION OF FUSIONS USING COMPRESSED MOLECULAR TAGGED NUCLEIC ACID SEQUENCE DATA SCHULTZHAUS, JANNA NICOLE 1685 §101§103DP Non-Final OA 85d overdue Pending Dec 07, 2023
18530606 METHODS AND SYSTEMS FOR REDUCING PHASING ERRORS WHEN SEQUENCING NUCLEICACIDS USING TERMINATION CHEMISTRY SISSON, BRADLEY L 1682 §103§112 Final Rejection 27d Pending Dec 06, 2023
18506885 METHODS AND COMPOSITIONS FOR MULTIPLEX PCR DAUNER, JOSEPH G 1684 DP Non-Final OA — Pending Nov 10, 2023
18505869 PROTEIN MELT ANALYSIS USING DIPYRROMETHENEBORON DIFLUORIDE COMPOUNDS ADAMS, MICHELLE 1797 §112Other Final Rejection — Pending Nov 09, 2023
18549134 COMPOSITIONS, KITS, AND METHODS FOR VARIANT-RESISTANT DETECTION OF TARGET VIRAL SEQUENCES CHEN, STACY BROWN 1672 §102§103§112Other Non-Final OA — Pending Sep 05, 2023
18450468 SYSTEMS AND METHODS FOR IDENTIFYING SEQUENCE VARIATION ASSOCIATED WITH GENETIC DISEASES MINCHELLA, KAITLYN L — §101§112DP Non-Final OA — Pending Aug 16, 2023
18261812 COMPOSITIONS, KITS AND METHODS FOR DIRECT AMPLIFICATION FROM CRUDE BIOLOGICAL SAMPLES WOOLWINE, SAMUEL C 1681 §103§112 Final Rejection 81d overdue Pending Jul 17, 2023
18345856 OLIGONUCLEOTIDE-TETHERED NUCLEOTIDES PHAM, KHAI QUYNH TIEN 1684 §103§112 Non-Final OA — Pending Jun 30, 2023
18343857 METHODS FOR ASSESSING GENOMIC INSTABILITY ELKINS, BLAKE HARRISON — §101§103§112 Non-Final OA — Pending Jun 29, 2023
18340581 COMPOSITIONS AND METHODS FOR HIGHLY SENSITIVE DETECTION OF TARGET SEQUENCES IN MULTIPLEX REACTIONS KAPUSHOC, STEPHEN THOMAS 1683 §103 Non-Final OA 56d Pending Jun 23, 2023
18338488 SYSTEMS AND METHODS FOR SEQUENCE DATA ALIGNMENT QUALITY ASSESSMENT BAILEY, STEVEN WILLIAM 1687 §101§112DPOther Final Rejection 70d Pending Jun 21, 2023
18209980 LABORATORY AUTOMATION USING LABWARE MOVEMENT HYUN, PAUL SANG HWA 1796 §102§103§112 Final Rejection — Pending Jun 14, 2023
18330737 SYSTEMS AND METHODS FOR IDENTIFYING SEQUENCE VARIATION VASSELL, MEREDITH ABBOTT — §101§103§112 Non-Final OA — Pending Jun 07, 2023
18330479 METHODS AND SYSTEMS FOR DESIGNING GENE PANELS COBANOGLU, DILEK B 3687 §101 Non-Final OA 21d Pending Jun 07, 2023
18317484 COMPOSITIONS AND METHODS FOR IMMUNE REPERTOIRE MONITORING GREENE, CAROLYN LEE 1681 §112 Final Rejection 42d Pending May 15, 2023
18143828 METHODS FOR DEEP ARTIFICIAL NEURAL NETWORKS FOR SIGNAL ERROR CORRECTION SCHULTZHAUS, JANNA NICOLE — §101§102§103§112DP Non-Final OA — Pending May 05, 2023
18312663 METHODS FOR DEEP ARTIFICIAL NEURAL NETWORKS FOR SIGNAL ERROR CORRECTION MRABI, HASSAN 2147 §103 Final Rejection 12d Pending May 05, 2023
18306419 MODELS FOR ANALYZING DATA FROM SEQUENCING-BY-SYNTHESIS OPERATIONS NEGIN, RUSSELL SCOTT 1686 §103§112DP Non-Final OA — Pending Apr 25, 2023
18137956 Methods and Kits to Detect Viral Particle Heterogeneity GREENE, CAROLYN LEE 1681 §112Other Non-Final OA 17d overdue Pending Apr 21, 2023
18297504 METHODS FOR OPERATING A BIOREACTOR WITH IMPELLER ASSEMBLY AND RELATED BIOREACTORS SORKIN, DAVID L 1774 §102§103§112 Final Rejection — Pending Apr 07, 2023
18130134 METHODS, SYSTEMS, AND COMPUTER READABLE MEDIA FOR EVALUATING VARIANT LIKELIHOOD WHALEY, PABLO S 1684 §101§102§112 Non-Final OA — Pending Apr 03, 2023
18118630 INTERACTIVE AMINO ACID SEQUENCE GUIDE FONSECA LOPEZ, FRANCINI ALVARENGA — §101§103 Non-Final OA — Pending Mar 07, 2023
18173386 NUCLEIC ACID EXTRACTION AND AMPLIFICATION CONTROLS AND METHODS OF USE THEREOF HAVLIN, ROBERT H 1626 §102§112 Final Rejection 7d Pending Feb 23, 2023
18161546 METHODS OF DIFFERENTIATION TO NEURONAL CELLS AND KITS THEREFOR BERTOGLIO, VALARIE E 1632 §102§103 Non-Final OA 15d Pending Jan 30, 2023
18006551 SYSTEMS AND METHODS FOR BIOLOGICAL ANALYSIS NGUYEN, HENRY H 1758 §101§102§103§112DP Final Rejection 4d overdue Pending Jan 23, 2023
18152862 SYSTEMS AND METHODS FOR PAIRED END SEQUENCING HILL, GRACELYN MARKHAM 1684 §101DP Non-Final OA — Pending Jan 11, 2023
17977788 SYSTEM AND METHOD FOR HIGH-YIELD TRANSIENT EXPRESSION IN MAMMALIAN CELLS LEITH, NANCY J — §102§103§112DP Non-Final OA — Pending Oct 31, 2022
17969419 COLORIMETRIC DETECTION OF NUCLEIC ACIDS CHUNDURU, SURYAPRABHA 1681 §102§103 Non-Final OA — Pending Oct 19, 2022
17960237 System and Method of Electroporation Protocol Optimization BOWERS, NATHAN ANDREW 1799 §103 Non-Final OA 29d Pending Oct 05, 2022
17947445 METHODS AND SYSTEMS FOR VISUALIZING DATA QUALITY DEWAN, KAMAL K 2163 §103 Final Rejection — Pending Sep 19, 2022
17932712 SYSTEMS AND METHODS FOR IDENTIFYING SOMATIC MUTATIONS LIN, JERRY 1685 §103§112Other Final Rejection — Pending Sep 16, 2022
17929782 Methods and Apparatuses for Estimating Parameters in a Predictive Model for Use in Sequencing-by-Synthesis SMITH, EMILIE ALINE 1686 §101§112DP Non-Final OA — Pending Sep 06, 2022
17699439 SYSTEMS AND METHODS FOR IDENTIFYING EXON JUNCTIONS FROM SINGLE READS KRIANGCHAIVECH, KETTIP 1686 §101 Final Rejection — Pending Mar 21, 2022
17761879 Cell Culture Media Tablets and Methods of Manufacture BARRON, SEAN C 1653 §103 Non-Final OA — Pending Mar 18, 2022
17686083 METHODS, COMPOSITIONS AND KITS FOR SMALL RNA CAPTURE, DETECTION AND QUANTIFICATION WILDER, CYNTHIA B 1681 §102Other Non-Final OA 21d Pending Mar 03, 2022
17574032 UNIVERSAL REPORTER-BASED GENOTYPING METHODS AND MATERIALS MUMMERT, STEPHANIE KANE 1681 §102§103 Final Rejection 45d overdue Pending Jan 12, 2022
17553295 System and Method for Control of Sequencing Process FONSECA LOPEZ, FRANCINI ALVARENGA 1685 §103 Non-Final OA 73d overdue Pending Dec 16, 2021
17524840 Device, System and Method for Fluid Delivery for Sequencing KASS, BENJAMIN JOSEPH 1798 §103§112 Non-Final OA — Pending Nov 12, 2021
17450812 System for Oxygenating a Biological Culture KWAK, DEAN P 1798 §103§112 Final Rejection 17d overdue Pending Oct 13, 2021
17443917 METHODS, SYSTEMS, AND COMPUTER-READABLE MEDIA FOR CALCULATING CORRECTED AMPLICON COVERAGES WOITACH, JOSEPH T — §101§103Other Non-Final OA — Pending Jul 28, 2021
17305239 WORKFLOW FOR DETECTION OF LIGANDS USING NUCLEIC ACIDS PRIEST, AARON A 1681 §102§103 Final Rejection 28d Pending Jul 01, 2021
17351068 Laser Capture Microdissection Systems and Method for Image Analysis WOITACH, JOSEPH T — §103Other Non-Final OA — Pending Jun 17, 2021
17226642 Hematopoietic Stem and Progenitor Cell Expansion System BERTOGLIO, VALARIE E 1632 §112 Non-Final OA 15d overdue Pending Apr 09, 2021
17250408 COMPOSITIONS AND METHODS FOR IMMUNE REPERTOIRE SEQUENCING GREENE, CAROLYN LEE 1681 §112 Non-Final OA — Pending Jan 18, 2021
17136800 SYSTEMS AND METHODS FOR MAPPING SEQUENCE READS WHALEY, PABLO S 3619 §101§103§112 Non-Final OA — Pending Dec 29, 2020
16863360 CLASSIFICATION AND ACTIONABILITY INDICES FOR CANCER JOHANNSEN, DIANA B 1682 §103§112 Non-Final OA — Pending Apr 30, 2020
16497143 POLYNUCLEOTIDE ADAPTERS AND METHODS OF USE THEREOF GREENE, CAROLYN LEE 1681 §103§112 Final Rejection — Pending Sep 24, 2019
18463329 COMPOSITIONS AND METHODS FOR MOLECULAR INVERSION PROBE ASSAYS GOLDBERG, JEANINE ANNE 1682 §102 Non-Final OA — Pending Sep 08, 2023
17942887 ARRAY-BASED METHODS FOR ANALYSING MIXED SAMPLES USING DIFFERENTLY LABELLED ALLELE-SPECIFIC PROBES DAUNER, JOSEPH G 1682 §102§112 Final Rejection 25d overdue Pending Sep 12, 2022
18327746 SYSTEMS AND METHODS FOR LAB MANAGEMENT HO, THOMAS Y 3624 §101§103§112 Final Rejection 30d Pending Jun 01, 2023
18167979 ELECTROLYTIC ELUENT GENERATORS CONTRERAS, CIEL P 1794 §102§103 Final Rejection 20d Pending Feb 13, 2023
18067711 METHOD FOR THE SEPARATION OF ANIONIC, CATIONIC, NEUTRAL AND ZWITTERIONIC ARSENIC SPECIES PEO, JONATHAN M 1779 §103 Final Rejection 2d overdue Pending Dec 18, 2022
18055064 Chromatography Baseline Stability HYUN, PAUL SANG HWA 1796 §103§112 Non-Final OA — Pending Nov 14, 2022

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